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Session | Date/Time | Location | Title | Type | Authors | Keywords |
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Monday, July 19th |
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PHYLOI001 | July 19th 10:00 am | Virtual/Virtual | Finding the limits of Piper amalago L., a widespread Neotropical shrub Log in to add this item to your schedule | Oral Paper | Hastings, Cara; Bornstein, Allan; Davidson, Chris; Smith, James. | phylogenomics Neotropical speciation species complex species delimitation Angiosperms353 |
PHYLOI002 | July 19th 10:15 am | Virtual/Virtual | Mitochondrial phylogenomics of mycoheterotrophic Ericaceae and parasitic Cuscuta Log in to add this item to your schedule | Oral Paper | Lin, Qianshi; Stefanovic, Sasa. | mitochondrial genome mycoheterotrophic plants parasitic plants horizontal gene transfer Ericaceae Cuscuta Convolvulaceae |
PHYLOI003 | July 19th 10:30 am | Virtual/Virtual | Phylogenomic analysis of the centric diatom order Thalassiosirales based on genome and transcriptome data Log in to add this item to your schedule | Oral Paper | Roberts, Wade; Alverson, Andrew. | Diatoms Genome skimming Transcriptome phylogenomics Genome Assembly |
PHYLOI004 | July 19th 10:45 am | Virtual/Virtual | Utilizing botanical big data to look for tiny toxic components Log in to add this item to your schedule | Oral Paper | Hunter, Elizabeth Sage; Literman, Robert; Handy, Sara. | Digitalis genomics plant identification DNA bioinformatics botanicals |
PHYLOI005 | July 19th 11:00 am | Virtual/Virtual | Adding to the Pantry of the FDA Reference Standard Library, GenometrakrCP Log in to add this item to your schedule | Oral Paper | Hunter, Elizabeth Sage; Literman, Robert; Zhang, Ning; Ott, Brittany; Wen, Jun; Greenbaum, Alexandra; Hsu, Erica; Handy, Sara. | database botanicals genomics chloroplasts plant identifcation DNA |
PHYLOI006 | July 19th 11:15 am | Virtual/Virtual | Phylogenomic analysis of New Zealand polyploid Azorella (Apiaceae) Log in to add this item to your schedule | Oral Paper | Ning, Weixuan; Meudt, Heidi; Nicolas, Antoine; Plunkett, Gregory; Tate, Jennifer. | Azorella Angiosperm353 phylogenomic genomic size variation polyploidy |
PHYLOI007 | July 19th 11:30 am | Virtual/Virtual | Whence came these plants most foul? Phylogenomics and biogeography of Orchidantha (Lowiaceae) Log in to add this item to your schedule | Oral Paper | Niissalo, Matti A.; Gardner, Elliot M.; Khew, Gillian S.; Šída, Otakar; Leong-Škorničková, Jana. | biogeography genomics Herbaceous HybSeq Lowiaceae Orchidantha Zingiberales |
PHYLOI008 | July 19th 11:45 am | Virtual/Virtual | Phylogenomic relationships in Nicotiana benthamiana: insights into the origin of the N. benthamiana lab variant Log in to add this item to your schedule | Oral Paper | Cauz-Santos, Luiz Augusto; Dodsworth, Steven; Jakob, Aljaž; Samuel, Rosabelle; Paun, Ovidiu; Chase, Mark. | Nicotiana benthamiana model organism phylogenomics RADseq |
Tuesday, July 20th |
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PHYLOII001 | July 20th 3:00 pm | Virtual/Virtual | Hyb-Seq resolves relationships among Cirsium, a recently radiated group of Compositae in North America Log in to add this item to your schedule | Oral Paper | Ackerfield, Jennifer; Siniscalchi, Carol; Mandel, Jennifer. | Compositae Cirsium Hyb-Seq phylogenomics |
PHYLOII002 | July 20th 3:15 pm | Virtual/Virtual | Implausibly strong gene tree discordance in a radiating plant group that seems to lack hybrids and neopolyploids? A case study of high-Andean Loricaria (Asteraceae) Log in to add this item to your schedule | Oral Paper | Kandziora, Martha; Gorospe, Juan Manuel; Gorospe, Juan Manuel; Sklenar, Petr; Fer, Tomas; Kolar, Filip; Schmickl, Roswitha. | |
PHYLOII003 | July 20th 3:30 pm | Virtual/Virtual | Is lack of phylogenetic resolution the hallmark of alpine radiation? Insights from the afro-alpine giants inDendrosenecio (Senecioneae, Asteraceae) Log in to add this item to your schedule | Oral Paper | Gizaw, Abel; Gorospe, Juan Manuel; Gorospe, Juan Manuel; Kandziora, Martha; Chala, Desalegn; Gustafsson, Lovisa; Zinaw, Abush; Salomón, Luciana; Eilu, Gerald; Brochmann, Christian; Kolar, Filip; Schmickl, Roswitha. | afro-alpine phylogenomics |
PHYLOII004 | July 20th 3:45 pm | Virtual/Virtual | A population perspective on plastome degradation in the mycoheterotrophic Corallorhiza maculata species complex Log in to add this item to your schedule | Oral Paper | Thixton, Hana; Santee, Mathilda Viola; Freudenstein, John; Barrett, Craig. | Orchidaceae parasite mycoheterotrophy floral morphology pseudogene |
PHYLOII005 | July 20th 4:00 pm | Virtual/Virtual | Diversification in the Perennial Endemic North American Clade of Apiaceae – How far are we from completion? Log in to add this item to your schedule | Oral Paper | Odufuwa, Phebian; Smith, James; Mansfield, Donald; Feist, Mary Ann; Darrach, Mark; Downie, Stephen; Plunkett, Gregory. | Apiaceae PENA convergent evolution NGS phylogenetic framework species delimitation generic circumscription |
PHYLOII006 | July 20th 4:15 pm | Virtual/Virtual | Chloroplast genomes of two species of Epidendrum (Orchidaceae, Laeliinae): developing resources for evolutionary studies in a mega-diverse genus Log in to add this item to your schedule | Oral Paper | Meza-Lazaro, Rubi N.; Cabrera, Lidia I.; Granados Mendoza, Carolina; Hágsater, Eric; Magallon, Susana; Salazar, Gerardo. | coding DNA Epidendrum gene loss Neotropics non-coding DNA Orchidaceae phylogenomics Plastome |
PHYLOII007 | July 20th 4:30 pm | Virtual/Virtual | Resolving Relationships in Mentzelia Section Bartonia (Loasaceae) in the Face of Cytonuclear Discordance Log in to add this item to your schedule | Oral Paper | Moore, Abigail; Schenk, John. | plastid genome cytonuclear discordance Genome skimming genomics hybridization incongruence Loasaceae Mentzelia phylogenomics species tree |
PHYLOII008 | July 20th 4:45 pm | Virtual/Virtual | Determining the timing of colonization of Pueraria montana using 3RAD data and the new tool, superBPP Log in to add this item to your schedule | Oral Paper | Hoffberg, Sandra; Mauricio, Rodney; Eaton, Deren. | colonization dated phylogeny BPP RADseq clonal reproduction invasive plants |
Thursday, July 22nd |
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PHYLOIII001 | July 22nd 10:00 am | Virtual/Virtual | Phylogenomics with Hyb-Seq Unravels Korean Hosta Evolution Log in to add this item to your schedule | Oral Paper | Yoo, Mi-Jeong; Lee, Byoung-Yoon; Kim, Sangtae; Lim, Chae Eun. | phylogenomics Korean Hosta Hyb-Seq Targeted enrichment divergence time estimation |
PHYLOIII002 | July 22nd 10:15 am | Virtual/Virtual | Plastid genomes provide resolution and support for phylogenetic relationships in Zinniinae (Asteraceae; Heliantheae) Log in to add this item to your schedule | Oral Paper | Skibicki, Sam; Barrett, Craig. | phylogenomics Asteraceae Herbariomics Plastid genomes Zinniinae |
PHYLOIII003 | July 22nd 10:30 am | Virtual/Virtual | A phylogenomics approach to resolving one of the world’s most diverse, tropical angiosperm radiations: Melastomataceae Log in to add this item to your schedule | Oral Paper | Bacci, Lucas; Cellinese, Nico; Michelangeli, Fabian; Judd, Walter; Reginato, Marcelo; Majure, Lucas. | Comparative Phylogenetics Neotropics Paleotropics radiation |
PHYLOIII004 | July 22nd 10:45 am | Virtual/Virtual | Plastome phylogenetics within the South American garlics (tribe Leucocoryneae, Allioideae, Amaryllidaceae) Log in to add this item to your schedule | Oral Paper | Sassone, Agostina; Blattner, Frank. | Alliaceae chloroplast phylogenomics whole genome shotgun (WGS) |
PHYLOIII005 | July 22nd 11:00 am | Virtual/Virtual | Custom-made or universal? The use of target capture to bridge macro- and microevolutionary processes in tillandsioid bromeliads (Tillandsia spp), a Neotropical rapid radiation Log in to add this item to your schedule | Oral Paper | Yardeni, Gil; de la Harpe, Marylaure; Barfuss, Michael; Till, Walter; Crego, Clara Groot; Rivera, Norma; Viruel, Juan; Paris, Margot; Hess, Jaqueline; Kroemer, Thorsten; Lexer, Christian; Paun, Ovidiu; LeRoy, Thibault. | Bromeliaceae Angiosperms353 targeted sequencing target capture evolutionary radiation Tillandsia population genetic structure phylogenomics |
PHYLOIII006 | July 22nd 11:15 am | Virtual/Virtual | Targeted enrichment of Angiosperms353 in the Dipsacales highlights nodes of conflict and clarity Log in to add this item to your schedule | Oral Paper | Lee, Aaron; Gilman, Ian S.; Srivastav, Mansa; Lerner, Ariel; Donoghue, Michael; Clement, Wendy. | Zabelia Heptacodium Angiosperms353 gene tree conflict cytonuclear discordance |
PHYLOIII007 | July 22nd 11:30 am | Virtual/Virtual | Damage in Antique DNA from Herbarium Specimens: Harmful Rust or Healthy Patina? Log in to add this item to your schedule | Oral Paper | Johnson, Matthew; Audi, Lauren; Zerega, Nyree; Gardner, Elliot M.. | target capture Herbariomics Artocarpus bioinformatics |
PHYLOIII008 | July 22nd 11:45 am | Virtual/Virtual | Phylogenomics of Fagaceae: evolutionary correlates of a pollination shift Log in to add this item to your schedule | Oral Paper | Gardner, Elliot M.; Arifiani, Deby; Pereira, Joan; Garner, Mira; Worcester, Lindsey; Hahn, Marlene; Manos, Paul; Cannon, Charles; Hipp, Andrew. | phylogenomics Fagaceae HybSeq pollination Systematics oaks supertrees Quercus Lithocarpus Castanopsis |
Friday, July 23rd |
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PHYLOIV001 | July 23rd 12:30 pm | Virtual/Virtual | Phylogenetic relationships of the strawberry subtribe Fragariinae (Rosaceae, Potentilleae) inferred from whole genome sequences Log in to add this item to your schedule | Oral Paper | Allen, Geraldine; Liston, Aaron; Eriksson, Torsten. | Fragariinae Fragaria phylogenomics Rosaceae hybridization polyploidy whole genome sequencing |
PHYLOIV002 | July 23rd 12:45 pm | Virtual/Virtual | A new approach using targeted sequence capture for phylogenomic studies across Cactaceae Log in to add this item to your schedule | Oral Paper | Acha, Serena; Acha, Serena; Majure, Lucas. | Cacti Opuntia Hyb-Seq Neotropics Target enrichment |
PHYLOIV003 | July 23rd 1:00 pm | Virtual/Virtual | New perspectives on the evolution of plant breeding systems in the radiation of Hawaiian Schiedea (Caryophyllaceae) Log in to add this item to your schedule | Oral Paper | McDonnell, Angela; Loke, Elena; Moore, Michael; Sakai, Ann; Weller, Stephen; Wagner, Warren; Skogen, Krissa; Weisenberger, Lauren; Wickett, Norman. | Genome Assembly Genome Duplication transcriptomics Targeted enrichment Probe design Hawaiian Islands Breeding system |
PHYLOIV004 | July 23rd 1:15 pm | Virtual/Virtual | Analysis of Global Vaccinium Species during an Undergraduate Course in Phylogenetics Log in to add this item to your schedule | Oral Paper | Yocca, Alan. | phylogenetics Undergraduate research Ancestral State reconstruction |
PHYLOIV005 | July 23rd 1:30 pm | Virtual/Virtual | Phylogenomics of a clade of temperate North American milkweeds based on extensive sampling of individuals within species Log in to add this item to your schedule | Oral Paper | Straub, Shannon; Wagner, Carl; Boutte, Julien; Fishbein, Mark. | Asclepias Apocynaceae Hyb-Seq species tree milkweed phylogenomics low-copy nuclear loci Plastome incomplete lineage sorting Introgression |
PHYLOIV006 | July 23rd 1:45 pm | Virtual/Virtual | Diversification of Kohleria (Gesneriaceae) Log in to add this item to your schedule | Oral Paper | Hansen, Kimberly; Clavijo, Laura; Zuluaga, Alejandro; Roalson, Eric. | Gesneriaceae Kohleria Andes Mountains high throughput sequencing |
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PHYLOV001 | July 23rd 3:00 pm | Virtual/Virtual | SuperBPP: a new method for inferring large-scale time-calibrated species trees Log in to add this item to your schedule | Oral Paper | Maya Lastra, Carlos Alonso; Hoffberg, Sandra; Landis, Henry; Eaton, Deren; Landis, Michael. | multispecies coalescent model Divergence time species tree |
PHYLOV002 | July 23rd 3:15 pm | Virtual/Virtual | Wide hybridization followed by aneuploidy explains the origin of the apple tribe Log in to add this item to your schedule | Oral Paper | Hodel, Richard; Zimmer, Elizabeth; Wen, Jun. | Cytonuclear discord Ancient hybridization Reticulate Evolution Amygdaloideae Rosaceae |
PHYLOV003 | July 23rd 3:30 pm | Virtual/Virtual | PickMe! A coalescent-based tool for taxa selection for phylogenomics Log in to add this item to your schedule | Oral Paper | Rusinko, Joseph; Yu, Cai; Allison, Doherty; Katherine, Thompson; Boutte, Julien; Fishbein, Mark; Straub, Shannon. | taxa selection milkweed species tree |
PHYLOV004 | July 23rd 3:45 pm | Virtual/Virtual | Patterns of Species Diversification in Geissorhiza (Iridaceae): Phylogeny, Biogeography, and Vulnerability in the Cape Floristic Region Log in to add this item to your schedule | Oral Paper | Eifler, Evan; Karimi, Nisa; Lemmon, Alan R.; Lemmon, Emily M.; Givnish, Thomas. | phylogenomics Iridaceae Cape Floristic Region diversification Speciation biogeography Trait evolution Mimicry |
PHYLOV005 | July 23rd 4:00 pm | Virtual/Virtual | Designing Rubiaceae-specific probes for targeted sequence capture in-silico Log in to add this item to your schedule | Oral Paper | Ball, Laymon; Lagomarsino, Laura. | target capture Rubiaceae Probe design |
PHYLOV006 | July 23rd 4:15 pm | Virtual/Virtual | Evaluating taxonomic circumscription in the Dudleya cymosa (Crassulaceae) species complex using high-throughput sequencing with an emphasis on rare and potentially undescribed subspecies in Southern California Log in to add this item to your schedule | Oral Paper | Hasenstab-Lehman, Kristen; Guilliams, C. Matt; Elvin, Mark; McCabe, Stephen; Yost, Jenn. | conservation Dudleya phylogenomics ddRAD-seq Crassulaceae |
PHYLOV007 | July 23rd 4:30 pm | Virtual/Virtual | Evolution of gene families in Solanales Log in to add this item to your schedule | Oral Paper | Ganju, Anish; Rosales, Maribel; Gupta, Ishaan; Gowda, Vinita. | polyploidy Solanaceae Convolvulaceae gene families Reconciliation phylogenetic trees |